Information for 8-AATGGAATCCACTTWA (Motif 8)

G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A
Reverse Opposite:
A C G T G C A T G T C A C T G A C T A G A C G T A T C G C T A G T C G A C G A T A G C T G T A C A G T C C G T A A C G T C G A T
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.707
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.8 +/- 22.1bp
Average Position of motif in Background51.8 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0115.1_Nkx2-6/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
----TAAGCCACTTAACATT
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
----TAAGCCACTTGAATTT
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
----TAAGCCACTTGAAATT
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
---CTTAACCACTTAAGGAT
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
----TAAGCCACTTGAAATT
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AATGGAATCCACTTWA
-------ACCACTTAA
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AATGGAATCCACTTWA-
-------ACCACTTGAA
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AATGGAATCCACTTWA
-------ACCACTTAA
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AATGGAATCCACTTWA----
---CATAACCACTTAACAAC
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AATGGAATCCACTTWA
------MRSCACTYAA
 G C T A T C G A A C G T C T A G C A T G C T G A C G T A A C G T A G T C A T G C G T C A A G T C A G C T A C G T C G A T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A