Information for 19-GGACCCWCTTATT (Motif 35)

A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
Reverse Opposite:
C T G A C T G A A C G T C G T A C G T A A T C G C G T A A C T G A T C G A C T G C A G T A G T C G T A C
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.699
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif84.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets60.3 +/- 18.7bp
Average Position of motif in Background46.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGACCCWCTTATT
---ACCACTTAA-
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGACCCWCTTATT
---ACCACTTAA-
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGACCCWCTTATT
TGGGGCCCAC-----
 A C G T A C G T A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGACCCWCTTATT
TTGACCTANTTATN
 A C G T A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGACCCWCTTATT
--AASCACTCAA-
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGACCCWCTTATT---
TAAGCCACTTAACATT
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGACCCWCTTATT---
CTTAACCACTTAAGGAT
 A C G T A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGACCCWCTTATT
-----CAATTAA-
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGACCCWCTTATT
---ACCACTTGAA
 A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGACCCWCTTATT---
CATAACCACTTAACAAC
 A C G T A C T G A C T G G T C A T G A C T A G C T A G C C G A T A T G C C G A T G A C T T G C A G A C T A G C T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C