Information for 23-CAYAAARAATTCTTYA (Motif 33)

A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
Reverse Opposite:
G A C T T C A G C T G A C G T A A C T G C G T A C G T A C G A T C G A T G A T C A C G T A C G T A C G T C T A G C A G T C T A G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.706
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 34.4bp
Average Position of motif in Background50.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAYAAARAATTCTTYA
TCATGAATWATTCAT--
 A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T A C G T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAYAAARAATTCTTYA-----
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAYAAARAATTCTTYA
-ATAAACAATTAAACA
 A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAYAAARAATTCTTYA
AAACAGACAAAGGAAT-----
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAYAAARAATTCTTYA
CATTAATTATTCAT--
 A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAYAAARAATTCTTYA
CTCATTAATTATGCAT--
 A C G T A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAYAAARAATTCTTYA
GTTCAAAAAAAAAATTC--
 A C G T A C G T A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAYAAARAATTCTTYA
AATAAACAATN-----
 A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAYAAARAATTCTTYA
TNCNNAACAATTTTTNC
 A C G T A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAYAAARAATTCTTYA
-ACAAAGGNBCCT---
 A G T C G C T A G A T C T C G A G T C A C G T A C T A G C G T A G C T A C G A T G C A T A G T C G A C T G A C T A G T C C G T A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T