Information for 7-CTGGTAMCCC (Motif 31)

A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T C G T A G T A C A G T C C G T A C T A G
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.873
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif31.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.4 +/- 32.1bp
Average Position of motif in Background50.8 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTAMCCC-----
NNNNGGTACCCCCCANN
 A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGGTAMCCC
GCTGTTACCCT
 A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGTAMCCC
SCCTAGCAACAG
 A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAMCCC---
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T C G T A G T C A A G T C A G T C A G T C A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C