Information for 22-GAGAGATCACAATGGG (Motif 30)

C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C T C G A A C G T G A C T C T A G A C G T A C T G T G C A A C G T G T A C A C G T T A G C A C G T G A T C
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 30.2bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG----
---NNTNNACAATGGGANNN
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-ANAGATAAGAA----
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-------AACAAAGG-
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
------GAACAATGGN
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-------RACAAWGG-
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-----VRAACAATGG-
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-----RNAACAATGG-
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAGAGATCACAATGGG
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGAGATCACAATGGG
-NCAGATAAGAANNN-
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGAGATCACAATGGG
---AGATAASR-----
 C A T G C G T A A C T G C G T A A C T G C G T A A C G T T G A C G T C A G A T C C T G A C G T A A C G T C T A G C T A G A C T G
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T