Information for 14-CTTCTACTTAGTC (Motif 28)

A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A A G T C A C G T C G T A C G T A A C T G A G C T C G T A A C T G C G T A C G T A A C T G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 21.9bp
Average Position of motif in Background78.8 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTCTACTTAGTC--
ACTCCTAATTAGTCGT
 A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0131.1_Pax4/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTACTTAGTC---
TGAACTAATTAGCCCAC
 A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T
G C A T T A C G T C G A C G T A A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G A T C A G T C T A G C C T G A G T A C

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTACTTAGTC---
AGCGCTAATTAGCGATT
 A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

LHX6/MA0658.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTCTACTTAGTC
--NCTAATTAGT-
 A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C
A C G T A C G T T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T A C G T

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTACTTAGTC--
NNNCACTAATTAGTNNT
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0027.1_Emx2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTACTTAGTC--
NNCCACTAATTAGNNNT
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTTCTACTTAGTC
---CTAATTAG--
 A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T

PH0135.1_Phox2a/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTCTACTTAGTC---
NNACTAATTAATNNNN
 A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0033.1_Gbx1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTCTACTTAGTC--
TGCCACTAATTAGTGTA
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTACTTAGTC--
NNNNNCTAATTAGTTTA
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T C T G A A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A