Information for 9-NAATCAAWSAGAA (Motif 20)

A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A T C G C G T A A C G T C G A T A C T G C G T A A C G T A C G T T C A G
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 21.8bp
Average Position of motif in Background41.2 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:NAATCAAWSAGAA
TAATCAATTA---
 A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:NAATCAAWSAGAA--
BAGTCATANTGAAAG
 A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-NAATCAAWSAGAA----
WNAGTCADAVTGAAACTN
 A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NAATCAAWSAGAA
TCATCAATCA---
 A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--NAATCAAWSAGAA
HNRAATCAAT-----
 A C G T A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NAATCAAWSAGAA
CCATCAATCAAA-
 A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-NAATCAAWSAGAA
CCAATCAA------
 A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-NAATCAAWSAGAA
CAAATCACTG----
 A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NAATCAAWSAGAA
GCCATAAATCA---
 A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-NAATCAAWSAGAA----
TGGACCAATCAGCACTCT
 A C G T A G T C C G T A C G T A C G A T T G A C G C T A T C G A C G A T A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T