Information for 7-GGRGTTGTATTTC (Motif 18)

A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C
Reverse Opposite:
C A T G G T C A C G T A G T C A C G A T T C G A A G T C G T C A C G T A T A G C G A T C G A T C G T A C
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.657
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.56%
Number of Background Sequences with motif342.4
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets42.2 +/- 24.4bp
Average Position of motif in Background49.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGRGTTGTATTTC------
----TTCTATTTTTAGNNN
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGRGTTGTATTTC----
NNNNTTTTTTTTTNAAC
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGRGTTGTATTTC--
-NNGTANTGTTTTNC
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T
A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGRGTTGTATTTC-
NNNTGTTGTTGTTNG
 A C G T A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGRGTTGTATTTC----
-----KCTATTTTTRGH
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------GGRGTTGTATTTC
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGRGTTGTATTTC
GGGAATTGTAGT--
 A C G T A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGRGTTGTATTTC-
--AGTTTCAKTTTC
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGRGTTGTATTTC----
GNATTTTTTTTTTGANC
 A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGRGTTGTATTTC---
TNNTTTCGTATTNNANN
 A C G T A C T G C T A G C T A G A T C G C G A T C A G T T C A G A G C T G C T A A C G T A C G T A C G T G A T C A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G