Information for 12-GCMGGTTCMGGGCGGC (Motif 12)

A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
Reverse Opposite:
A C T G A T G C A T G C A C T G G T A C A G T C A G T C A C G T A C T G G T C A C T G A G T A C A G T C A C T G A T C G G T A C
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 24.8bp
Average Position of motif in Background34.1 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC
------TNNGGGCAG-
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC
--GGGGGCGGGGCC--
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC---
---NNTNAGGGGCGGNNNN
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCMGGTTCMGGGCGGC-
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC----
---NNTNNGGGGCGGNGNGN
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCMGGTTCMGGGCGGC
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCMGGTTCMGGGCGGC
AAGGKGRCGCAGGCA---
 A C G T A C G T A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCMGGTTCMGGGCGGC
SDGCAGGTGCNS------
 A C G T A C G T A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC
BCNGGTTCTAGANCN-
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCMGGTTCMGGGCGGC
--TGCCCNGGGGCA--
 A C T G A T G C T G A C A C T G A C T G A G C T A C G T A G T C T G C A C T A G A C T G A C T G A G T C T A C G A T C G A G T C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T