Information for 7-TCTVGCCCAGGGCCAG (Motif 19)

A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T C G A T G C G T A C A G T C C G A T A T C G A C T G A C T G A G T C A G T C C G T A A C T G T C G A
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.807
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 20.0bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTVGCCCAGGGCCAG-
-TTGGCANNNTGCCAAG
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G A C G T
A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
--CCGCCCAAGGGCAG
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTVGCCCAGGGCCAG-
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
---TGCCCCAGGGCA-
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
------CAAAGGTCAG
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
--TTGCCCTAGGGCAT
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
--TCACCTCTGGGCAG
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
---TGCCCCAGGGCA-
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTVGCCCAGGGCCAG
-CTGGCAGNCTGCCA-
 A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTVGCCCAGGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A G T C A C G T T A C G A C T G T G A C A G T C A T G C C G T A C T A G A C T G A T C G A T G C A G T C G T C A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C