Information for 13-AATTTACCAC (Motif 17)

C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A C G T C G T A C G T A G T C A A C G T C G A T
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.942
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.4 +/- 30.1bp
Average Position of motif in Background55.8 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AATTTACCAC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AATTTACCAC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AATTTACCAC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AATTTACCAC-
-ATTTTCCATT
 C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATTTACCAC----
ANNTTTTACGACNTNN
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATTTACCAC----
NNNTTTTACGACNTTN
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATTTACCAC-
-ATTTTCCATT
 C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AATTTACCAC
NTTTTACGAC
 C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AATTTACCAC-
NTTTTACGACC
 C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATTTACCAC----
NNGTTTTACGACTTTA
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A