p-value: | 1e-5 |
log p-value: | -1.216e+01 |
Information Content per bp: | 1.959 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.7 +/- 11.1bp |
Average Position of motif in Background | 66.8 +/- 25.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTAGGCCAG AAYTAGGTCA- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGTAGGCCAG TATAAGTAGGTCAA |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTAGGCCAG -CTAGGCCT- |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGTAGGCCAG- ---AGGCCTNG |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTAGGCCAG--- --AAGGCAAGTGT |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGTAGGCCAG--- ---ATGCCAGACN |
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NFIC/MA0161.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGTAGGCCAG ----TGCCAA |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGTAGGCCAG--- ---TGCCCAGNHW |
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NFIX/MA0671.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTAGGCCAG- --CGTGCCAAG |
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PB0094.1_Zfp128_1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGTAGGCCAG--- TTNGGGTACGCCNNANN |
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