Information for 24-CGATGCAGCCASC (Motif 38)

A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
Reverse Opposite:
A T C G A T C G C A G T A C T G A T C G A T G C A C G T A T C G G T A C G T C A A C G T A T G C T C A G
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.754
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif179.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets42.0 +/- 25.5bp
Average Position of motif in Background48.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGATGCAGCCASC
GRTGMTRGAGCC---
 A C G T A C G T A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CGATGCAGCCASC
-----CAGCC---
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGATGCAGCCASC
----BCAGACWA-
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGATGCAGCCASC
----CGTGCCAAG
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGATGCAGCCASC
------TGCCAA-
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGATGCAGCCASC
----CCAGACAG-
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGATGCAGCCASC
---CGGAGC----
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGATGCAGCCASC------
----SCAGYCADGCATGAC
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGATGCAGCCASC-
----CCAGACRSVB
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGATGCAGCCASC---
----GCGACCACCGAA
 A G T C A T C G G T C A A C G T A C T G A T G C C G T A A T C G A T G C A G T C G C T A A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A