Information for 19-TGCCTGAGTTCAG (Motif 29)

A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
Reverse Opposite:
A T G C A C G T A T C G C G T A C G T A A G T C A C G T A G T C C T G A A C T G A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCCTGAGTTCAG
---CAAAGGTCAG
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCCTGAGTTCAG
-GCCTCAGGGCAT
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGCCTGAGTTCAG
----TRAGGTCA-
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTGAGTTCAG---
NNNNTGAATTCANNNC
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCCTGAGTTCAG
TCACCTCTGGGCAG
 A C G T A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCTGAGTTCAG
TGACCTARTT---
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCCTGAGTTCAG
-SCCTSAGGSCAW
 A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGCCTGAGTTCAG
GAGTTCATTGAGTTCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCCTGAGTTCAG
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTGAGTTCAG
NNACTTGCCTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G C G T A A C T G A C G T A C G T A T G C G T C A A T C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T