Information for 9-CGTCACGCGT (Motif 26)

A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C T G A C G T A C T G C T G A A T G C A C T G
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.884
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 14.7bp
Average Position of motif in Background56.9 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGTCACGCGT
GGTCACGTGG
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGTCACGCGT-------
CGTCACGCATGACTGCA
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGTCACGCGT-
-GGCACGCGTC
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGTCACGCGT---
GTGCCACGCGACTG
 A C G T A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGTCACGCGT
GGTCACGTGC
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CGTCACGCGT
---CACGCA-
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGTCACGCGT-------
CGTCACGCATGACTGCA
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGTCACGCGT
AGTCACGC--
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGTCACGCGT-
-GTCACGTGNT
 A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACGCGT
ACGTCA-----
 A C G T A G T C A T C G A G C T A G T C G T C A T G A C A C T G A G T C A C T G C G A T
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T