Information for 9-CAGACAGCAGSGCTCT (Motif 15)

A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G G T C A T A C G A G T C A T C G G A T C C G A T A T C G A G T C G C A T A C T G A G C T A G T C C G A T A T C G
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.748
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.9 +/- 24.4bp
Average Position of motif in Background51.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCAGSGCTCT
CCAGACAG---------
 A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCAGSGCTCT
CCAGACRSVB-------
 A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAGACAGCAGSGCTCT
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGACAGCAGSGCTCT
--GACAGCTGCAG---
 A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCAGSGCTCT
BCAGACWA---------
 A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGACAGCAGSGCTCT
-DCHCAGCAGGRGGCC
 A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGACAGCAGSGCTCT
--AACAGCTGCAG---
 A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCAGSGCTCT
TGAGTCAGCA-------
 A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGACAGCAGSGCTCT
--CACAGN--------
 A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCAGSGCTCT
NGNGACAGCTGCN----
 A C G T A T G C C G T A C T A G C T G A A G T C C G T A A C T G A T G C G C T A C A T G A T G C A C T G A T G C A C G T A G T C A G C T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T