Information for 6-GCACTATTGA (Motif 13)

A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 30.7bp
Average Position of motif in Background65.3 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCACTATTGA--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCACTATTGA
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCACTATTGA
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTATTGA
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCACTATTGA-----
NAAANTTATTGAANCAN
 A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACTATTGA----
NNNCACTAATTANTNN
 A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

POU4F3/MA0791.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCACTATTGA----
ATGCATAATTAATGAG
 A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCACTATTGA-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCACTATTGA
---CAATTAA
 A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCACTATTGA-----
-----ATTGATTYND
 A C T G A G T C C G T A A G T C A G C T G T C A G C A T C G A T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T