Information for 5-YTGYMCTCTGGKKSCM (Motif 10)

A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
Reverse Opposite:
A C G T C T A G A T C G G T C A G T C A A T G C A G T C C G T A A C T G C G T A A T C G A C T G C T A G A T G C C G T A C T G A
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 22.8bp
Average Position of motif in Background32.6 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM
CTGACCTTTG------
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---YTGYMCTCTGGKKSCM-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YTGYMCTCTGGKKSCM-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM
-TGWCCTCARNTGACC
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----YTGYMCTCTGGKKSCM
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM
NTGCCCANNGGTNA--
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM
-TGGACTTTGNNCTCN
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM-
-TGGACTTTGNNCTNTG
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YTGYMCTCTGGKKSCM----
-TGACCTAAAGTAACCTCTG
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YTGYMCTCTGGKKSCM
-TGACCTYA-------
 A G C T A C G T A T C G G A T C G T A C A T G C A C G T A G T C A C G T A C T G A T C G A C G T A C G T A T G C A G T C G T C A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T