Information for 12-CTTTGGCATT (Motif 12)

A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
Reverse Opposite:
G T C A C T G A A C G T A C T G G T A C G T A C G T C A T C G A T G C A A C T G
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.832
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif266.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets43.6 +/- 26.9bp
Average Position of motif in Background50.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTTTGGCATT
NNTTGGCANN
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTTTGGCATT
-NTTGGCANN
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTTTGGCATT
--TTGGCA--
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTTGGCATT
GGTTGGCAT-
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTTGGCATT
-CTTGGCAA-
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTTGGCATT
NGTGGGCAT-
 A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGGCATT-
TGGACTTTGNNCTCN
 A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGGCATT--
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGGCATT--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------CTTTGGCATT
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G A C T G T G A C G T C A G A C T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T