Information for 5-KMTCCCTCTGCTK (Motif 5)

A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G A G T C G T C A A C T G C T G A A C T G A C T G A C T G G T C A C A T G G T C A
p-value:1e-15
log p-value:-3.651e+01
Information Content per bp:1.885
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.1 +/- 27.8bp
Average Position of motif in Background57.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----KMTCCCTCTGCTK--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KMTCCCTCTGCTK
--GCCATCTGTT-
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KMTCCCTCTGCTK--
---CCCCCTGCTGTG
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KMTCCCTCTGCTK
--ACCATCTGTT-
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--KMTCCCTCTGCTK----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KMTCCCTCTGCTK
--RCCATMTGTT-
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KMTCCCTCTGCTK
NYTTCCCGCC----
 A C G T A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---KMTCCCTCTGCTK----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KMTCCCTCTGCTK--
-GACCCCCCGCTGTG
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KMTCCCTCTGCTK---
-GACCCCCCGCTGCGC
 A C G T G T A C A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C