Information for 4-GGCTTATGTACAC (Motif 4)

C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T C G T A A G T C C G T A A C G T C G T A C G T A A T C G T A G C A G T C
p-value:1e-16
log p-value:-3.717e+01
Information Content per bp:1.823
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.1 +/- 13.1bp
Average Position of motif in Background62.4 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCTTATGTACAC-----
-NTNTATGTGCACATNNN
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCTTATGTACAC---
NNNVCTGWGYAAACASN
 A C G T C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGCTTATGTACAC---
----TATGTAAACANG
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCTTATGTACAC-----
-NNGTATGTGCACATNNN
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCTTATGTACAC-
----AAAGTAAACA
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GGCTTATGTACAC-
------DGTAAACA
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCTTATGTACAC--
---WWATRTAAACAN
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCTTATGTACAC-
--NCTAAGTAAACA
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T
A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCTTATGTACAC-----
---CAAAGTAAACANNNN
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCTTATGTACAC-
----AAAGTAAACA
 C T A G A T C G A T G C A C G T C G A T T C G A G A C T A C T G A C G T C G T A G T A C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A