Information for 10-CCTACTGGGA (Motif 20)

A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A
Reverse Opposite:
C G A T A G T C A G T C A G T C C G T A C T A G A G C T C G T A C T A G T A C G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif119.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets62.2 +/- 23.5bp
Average Position of motif in Background52.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGGA--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CCTACTGGGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCTACTGGGA---
RGSMTBCTGGGAAAT
 A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGGGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCTACTGGGA
CCTGCTGAGH
 A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTACTGGGA-
-WDNCTGGGCA
 A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTACTGGGA--
-CTTCTGGGAAA
 A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTACTGGGA---
---CSTGGGAAAD
 A T G C A G T C G C A T T C G A A G T C C G A T A C T G A C T G A C T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A