Information for 7-CCTCTCTGAGTAGCAG (Motif 18)

A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G
Reverse Opposite:
A T G C C G A T A C T G A T G C A G C T T G C A G A T C C G A T A T G C T C G A A C T G C T G A C A T G T C G A T C A G T A C G
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.681
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.0 +/- 27.0bp
Average Position of motif in Background54.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG-
-----NTGATTGACAGN
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG-
-----BTGABTGACAGS
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG--
------TGAGTGACAGSC
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:4
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCTGAGTAGCAG
CTTATCTGTGAGGAGCAG
 A C G T A C G T A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G
T G A C G A C T C G A T C G T A A C G T A G T C G C A T A T C G A C G T T C A G G T C A T A C G T C A G G C T A T C A G T G A C C G T A A T C G

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:5
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTCTGAGTAGCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.45
Offset:2
Orientation:forward strand
Alignment:CCTCTCTGAGTAGCAG
--GCTATAAATAGC--
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G
A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.45
Offset:11
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG-
-----------CACAGN
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.44
Offset:0
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG----
YCAGGCWCAGTACCAGGCTC
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.44
Offset:4
Orientation:reverse strand
Alignment:CCTCTCTGAGTAGCAG
----CTTGAGTGGCT-
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.44
Offset:2
Orientation:forward strand
Alignment:CCTCTCTGAGTAGCAG
--ACTATAAATAGA--
 A G T C A G T C A C G T G T A C A G C T G T A C A C G T A T C G C G T A C T A G A C G T T C G A T A C G A G T C G C T A A T C G
A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T