Information for 11-AAAGGCCATKGCC (Motif 16)

T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
Reverse Opposite:
C A T G A C T G A G T C G T C A C T G A A C G T A C T G T A C G G A T C A G T C C G A T A C G T A G C T
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.746
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.7 +/- 25.5bp
Average Position of motif in Background63.2 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGGCCATKGCC
CAAGGHCANV---
 T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGCCATKGCC
NANAAGGGCGTGGTC
 A C G T A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCCATKGCC
TCAAGGTCAT----
 A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAGGCCATKGCC--
-NAGGTCANTGACCT
 T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGCCATKGCC
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCCATKGCC
BTCAAGGTCA-----
 A C G T A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGGCCATKGCC
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGCCATKGCC
TCAAGGTCAN----
 A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCCATKGCC
TTCAAGGTCAT----
 A C G T A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCCATKGCC
CAAAGGTCAG----
 A C G T T C G A C G T A C G T A A C T G C A T G A T G C G T A C G T C A A G C T A C G T A C T G A G T C G A T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T