Information for 8-GGCTCCCYGMRRT (Motif 10)

A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
Reverse Opposite:
C G T A G A T C A G T C A C T G A G T C C T G A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 14.6bp
Average Position of motif in Background40.6 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCTCCCYGMRRT
-GCTCCG------
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTCCCYGMRRT--
GACCCCCCGCTGTGC
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCCCYGMRRT
TTGGGGGCGCCCCTAG--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCTCCCYGMRRT-
GACCCCCCGCTGTG
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCTCCCYGMRRT--
GGCCYCCTGCTGDGH
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCTCCCYGMRRT--
GACCCCCCGCTGCGC
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGCTCCCYGMRRT
---TCCCCA----
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCYGMRRT
NGCTN--------
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTCCCYGMRRT-
GACCCCCCGCGAAG
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCYGMRRT
GGCGCGCT-----
 A C T G A C T G A G T C A C G T A T G C A G T C A G T C A G C T A C T G G T A C T C A G C T A G A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T