Information for 1-WAWGTAAACANVV (Motif 1)

G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
Reverse Opposite:
A C G T A G T C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T G A C T C G A T
p-value:1e-151
log p-value:-3.492e+02
Information Content per bp:1.652
Number of Target Sequences with motif307.0
Percentage of Target Sequences with motif38.33%
Number of Background Sequences with motif2979.0
Percentage of Background Sequences with motif6.35%
Average Position of motif in Targets52.9 +/- 19.9bp
Average Position of motif in Background50.0 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:WAWGTAAACANVV
AAAGTAAACA---
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:forward strand
Alignment:WAWGTAAACANVV
AAAGTAAACA---
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-WAWGTAAACANVV-
CAAAGTAAACANNNN
 A C G T G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:WAWGTAAACANVV
TATGTAAACANG-
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--WAWGTAAACANVV
NCWRWGTAAACANSV
 A C G T A C G T G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--WAWGTAAACANVV
NCTAAGTAAACA---
 A C G T A C G T G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:WAWGTAAACANVV
WAAGTAAAYA---
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:WAWGTAAACANVV
TAAGTAAACAAA-
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--WAWGTAAACANVV--
AAAAAGTAAACAAAGAC
 A C G T A C G T G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.94
Offset:0
Orientation:forward strand
Alignment:WAWGTAAACANVV
TATGTAAATAT--
 G C T A C T G A C G T A C T A G A G C T G T C A C G T A C G T A A G T C C G T A C T G A T C A G T G C A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T