Information for 5-TCCGTTTCCAAGATGT (Motif 9)

C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
Reverse Opposite:
C G T A T A G C G T C A A G C T A G T C A C G T A G C T C T A G A C T G C G T A T C G A C G T A G T A C A C T G C T A G G C T A
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.9 +/- 27.7bp
Average Position of motif in Background58.5 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTTTCCAAGATGT
NTNNCGTATCCAAGTNN-
 A C G T A C G T C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCCGTTTCCAAGATGT
---ATTTCCAAGAA--
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCCGTTTCCAAGATGT
---TTTTCCA------
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCAAGATGT
--ATTTTCCATT----
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCGTTTCCAAGATGT
----TTTCCCAGAAN-
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCAAGATGT
--ATTTTCCATT----
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCGTTTCCAAGATGT
NNCGTTGCTATGGNN-
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTTTCCAAGATGT---
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCAAGATGT
--ATTTTCCATT----
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCCGTTTCCAAGATGT
-CTGTTGCTAGGS---
 C A G T A G T C G T A C A C T G A C G T A G C T A C G T A G T C A G T C C T G A G T C A A C T G C T G A A C G T A C T G C G A T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T