Information for 7-TTCCTTTGGCTCT (Motif 7)

A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C T G A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 16.6bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTTGGCTCT--
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTCCTTTGGCTCT
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTCCTTTGGCTCT
----NTTGGCANN
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTCCTTTGGCTCT
-----TTGGCA--
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCCTTTGGCTCT
-CCGATTGGCT--
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTCCTTTGGCTCT
--CCTTTGTTTT-
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCCTTTGGCTCT
---NNTTGGCANN
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTCCTTTGGCTCT
--CCWTTGTY---
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTCCTTTGGCTCT
--CCATTGTTTT-
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCCTTTGGCTCT-
--TGATTGGCTANN
 A C G T A C G T G T A C A G T C C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T