Information for 4-TRATACKGGATCCTGC (Motif 5)

A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A C T A G A C T G G C T A A G C T A T G C A G T C G T A C C T A G A G C T C G T A A G C T G A T C C T G A
p-value:1e-13
log p-value:-3.015e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.1 +/- 16.7bp
Average Position of motif in Background43.2 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TRATACKGGATCCTGC--
------SNGCACCTGCHS
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TRATACKGGATCCTGC-
-------ACATCCTGNT
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TRATACKGGATCCTGC-
--------NCACCTGTN
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TRATACKGGATCCTGC-----
------GGCCYCCTGCTGDGH
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TRATACKGGATCCTGC-
-------NNCACCTGNN
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:11
Orientation:forward strand
Alignment:TRATACKGGATCCTGC-
-----------GCTGTG
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TRATACKGGATCCTGC-
-------TACACCTGTC
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TRATACKGGATCCTGC----
--------CCCCCTGCTGTG
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TRATACKGGATCCTGC
------RYHYACCTGB
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TRATACKGGATCCTGC
-CATGCGGGTAC----
 A G C T C T A G C T G A C G A T T C G A A G T C A C T G A C T G A T C G C T G A C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T