Information for 5-GTTTCTTGGTTTT (Motif 4)

A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A T G C A C G T A C G T A A G T C A G T C C T G A C T G A A C T G C G T A C G T A C G T A A G T C
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 25.2bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTTGGTTTT-
NNNTTAATTGGTTTTT
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTTCTTGGTTTT--
-NTTATTGATTTTTT
 A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTTCTTGGTTTT
GAATGTTTGTTT-
 A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTTGGTTTT---
NNNTCCTTTGTTCTNNN
 A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTTGGTTTT---
TNNTCCTTTGTTCTNNT
 A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCTTGGTTTT
NNAATTTTATTGGNTN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTTGGTTTT-
NNNTTAATTGGTTTTN
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTTGGTTTT-
NTNTTGTTGTTTGTN
 A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTTGGTTTT-
GNNTTAATTGGTTGTT
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTTGGTTTT
NTTTTATTGG----
 A C G T A C T G A C G T A C G T A C G T A G T C A G C T A G C T A C T G A C T G A C G T A C G T A C G T A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T