Information for 14-CGGACAGCAA (Motif 20)

A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.412e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 23.5bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGGACAGCAA
--CACAGN--
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGACAGCAA---
--GTCAGCANNTN
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGACAGCAA--
--NACAGGAAAT
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGACAGCAA--
--AACAGGAAGT
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGACAGCAA----
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGACAGCAA
TTGACAGC--
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGACAGCAA
TGAGTCAGCA-
 A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGACAGCAA---
---ACAGGAAGTG
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CGGACAGCAA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGACAGCAA
CCAGACAG---
 A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T