Information for 11-ACTAACCATS (Motif 18)

C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
Reverse Opposite:
A T G C G T C A A C G T A C T G T C A G G A C T C G A T C G T A C T A G C G A T
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.685
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif483.3
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets54.1 +/- 23.0bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACTAACCATS--
AAAAATAACAAACGG
 A C G T A C G T A C G T C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTAACCATS
--NAACAAT-
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTAACCATS
-GTAAACAT-
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACTAACCATS
GAATATTCAT-
 A C G T C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTAACCATS
TCATCAATCA--
 A C G T A C G T C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTAACCATS
NNTAATTANN
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTAACCATS
-YTAATCCY-
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTAACCATS--
-CTAATCCTCTT
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTAACCATS-
AATAAACAATN
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

LHX6/MA0658.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTAACCATS
ACTAATTAGC
 C G T A G A T C G C A T C G T A C T G A A G T C G T A C T G C A C A G T T A C G
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C