Motif 16

Information for 9-CTCCCGGCAT (Motif 16)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.846e+01
Information Content per bp:	1.839
Number of Target Sequences with motif	15.0
Percentage of Target Sequences with motif	1.89%
Number of Background Sequences with motif	131.5
Percentage of Background Sequences with motif	0.27%
Average Position of motif in Targets	49.6 +/- 27.8bp
Average Position of motif in Background	51.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)	0.2
Multiplicity (# of sites on avg that occur together)	1.07
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:	1
Score:	0.64
Offset:	0
Orientation:	reverse strand
Alignment:	CTCCCGGCAT- GTACCCGCATN

GCM2/MA0767.1/Jaspar

Match Rank:	2
Score:	0.64
Offset:	1
Orientation:	reverse strand
Alignment:	CTCCCGGCAT- -TACCCGCATN

PB0140.1_Irf6_2/Jaspar

Match Rank:	3
Score:	0.63
Offset:	-4
Orientation:	forward strand
Alignment:	----CTCCCGGCAT- ACCACTCTCGGTCAC

ELK4/MA0076.2/Jaspar

Match Rank:	4
Score:	0.63
Offset:	-3
Orientation:	forward strand
Alignment:	---CTCCCGGCAT CCACTTCCGGC--

E2F4/MA0470.1/Jaspar

Match Rank:	5
Score:	0.63
Offset:	-2
Orientation:	reverse strand
Alignment:	--CTCCCGGCAT NNTTCCCGCCC-

PB0024.1_Gcm1_1/Jaspar

Match Rank:	6
Score:	0.62
Offset:	-2
Orientation:	forward strand
Alignment:	--CTCCCGGCAT---- TCGTACCCGCATCATT

E2F6/MA0471.1/Jaspar

Match Rank:	7
Score:	0.62
Offset:	-2
Orientation:	reverse strand
Alignment:	--CTCCCGGCAT NCTTCCCGCCC-

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:	8
Score:	0.61
Offset:	-1
Orientation:	reverse strand
Alignment:	-CTCCCGGCAT- TTTCCCGCCMAV

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:	9
Score:	0.61
Offset:	-2
Orientation:	forward strand
Alignment:	--CTCCCGGCAT--- ATTTCCCAGVAKSCY

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:	10
Score:	0.61
Offset:	0
Orientation:	reverse strand
Alignment:	CTCCCGGCAT TTCCCGCCWG