Information for 11-TARTTWAGMAYCW (Motif 8)

A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
Reverse Opposite:
C G A T A T C G C T G A A C G T A C T G A G T C C G A T C G A T C G T A C G T A A G C T A C G T C G T A
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.824
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 15.0bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0153.1_Prop1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGAATTAATTAAGAAAC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TARTTWAGMAYCW
CNAGTTAATTAATAANN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGCGTTAATTAATTACC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TARTTWAGMAYCW
ATATATTAATTAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A A C G T A C G T A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGAATTAATTAACAATA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A A C G T

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TARTTWAGMAYCW
GNNAATTAATTAATCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T A C G T A C G T

PH0054.1_Hoxa7_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGAGTTAATTAATAAGC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T A G C T C A G G T C A C T A G C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A C T C G T A C G T A A C T G G T A C A C G T

Alx4/MA0853.1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGCATTAATTAATTACC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C A C G T

PH0002.1_Alx4/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGCATTAATTAATTACC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TARTTWAGMAYCW
CGAATTAATTAAAAACC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G A T G C A T C G T A A C T G G T A C C G T A A G C T A T G C C G T A
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C A C G T