Information for 9-TTATTCCTATGCCAAC (Motif 11)

A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C
Reverse Opposite:
C T A G C G A T C G A T T A C G A C T G G T A C C T G A C G A T C T G A C A T G A C T G C T G A C T G A G C A T G C T A C T G A
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.688
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets65.7 +/- 18.6bp
Average Position of motif in Background58.6 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTATTCCTATGCCAAC-
---TTGCCATGGCAACC
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTATTCCTATGCCAAC-
---TTGCCATGGCAACN
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

RFX5/MA0510.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-
-CGTTGCCATGGCAACG
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-----
-----ACTATGCCAACCTACC
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

RFX4/MA0799.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-
-CGTTGCCATGGCAACG
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-
-CGTTGCCATGGCAACG
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-
--------ATGCCAACC
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC
--GTTGCCATGGCAAC
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

RFX2/MA0600.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTATTCCTATGCCAAC-
-CGTTGCCATGGCAACG
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C A C G T
A C G T A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTATTCCTATGCCAAC
-KGTTGCCATGGCAAC
 A G C T C A G T C G T A A G C T A G C T T G A C G A T C A G C T G C T A A G C T A C T G T G A C A G T C C G T A C G T A G A T C
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C