Information for 8-CGGCGGCTSGCRACGG (Motif 10)

A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
Reverse Opposite:
A G T C G T A C A C T G A G C T A G T C A C T G A T G C A T C G C G T A A C T G A T G C G T A C A C T G T A G C A G T C A C T G
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.796
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 19.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
CGCCCCCTGACA----
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
----NGCTN-------
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CGGCGGCTSGCRACGG-
--CCGCATAGCAACGGA
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CGGCGGCTSGCRACGG
TGTTKCCTAGCAACM-
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGGCGGCTSGCRACGG
AGCTCGGCGCCAAAAGC---
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCTSGCRACGG
NNGTCGCGTGNCAC---
 A C G T A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
-NVCAGCTGBBNN---
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
NNGCAGCTGTC-----
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
-----GCTGTCAA---
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CGGCGGCTSGCRACGG
-----CTTGGCAA---
 A G T C A C T G A C T G A G T C A C T G A T C G A G T C A C G T A T G C T A C G A G T C C T A G C T G A G T A C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T