Information for 7-CTAGACGTCT (Motif 39)

A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C T G C G A T A G T C A C G T T C G A A T C G
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.871
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 31.5bp
Average Position of motif in Background40.4 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTAGACGTCT--
CAAGACGCCTTA
 A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAGACGTCT
CCAGACRSVB
 A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACGTCT--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTAGACGTCT
TGTCTAGACG---
 A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTAGACGTCT
CCAGACAG--
 A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTAGACGTCT
--TGACGTCA
 A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTAGACGTCT
----ACGTCA
 A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGACGTCT------
CCNNACCATCTGGCCTN
 A C G T A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTAGACGTCT----
TGGGCGACGTCGTTAA
 A C G T A C G T A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTAGACGTCT
ATGCCAGACN---
 A C G T A C G T A C G T A T G C A C G T C G T A A C T G C G T A G T A C C T A G A C G T A G T C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T