Information for 6-ACAAATGAAT (Motif 37)

C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C G T C A C G A T C G A T A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.769e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets69.3 +/- 22.8bp
Average Position of motif in Background48.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------ACAAATGAAT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAAATGAAT-----
NNNTATTGAATTGNNN
 A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATGAAT
RNAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAAATGAAT
AACAAAGG---
 A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAAATGAAT
RACAAWGG---
 A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACAAATGAAT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACAAATGAAT-
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACAAATGAAT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAAATGAAT-
ATAAACAATTAAACA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATGAAT
AAAACAAAGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T