Information for 13-GGAGGCAGGCCGA (Motif 31)

A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
Reverse Opposite:
A C G T A G T C A T C G A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 15.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGAGGCAGGCCGA------
-----CAGGCCNNGGCCNN
 A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCAGGCCGA
AGGTGNCAGACAG-
 A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGCAGGCCGA
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAGGCAGGCCGA--
-----GAGSCCGAGC
 A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGAGGCAGGCCGA
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGAGGCAGGCCGA
----CTAGGCCT-
 A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAGGCCGA
GGGCGGGAAGG---
 A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGAGGCAGGCCGA-
------AGGCCTNG
 A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAGGCCGA
AGGTGHCAGACA--
 A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------GGAGGCAGGCCGA
NNNNGGGGGAAGANGG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T A G A T G C C G T A A C T G A C T G A G T C A T G C A C T G C G T A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T