Information for 15-CTCDGGCAGGTBCCAC (Motif 25)

A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G T A G C G T C A A G T C G T A C A C G T A T C G A T G C A G T C G C A T A C T G T C G A A T C G
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.830
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 21.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
---TGGCACGTGCCA-
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
---CGGCACGTGCCA-
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCDGGCAGGTBCCAC
---SDGCAGGTGCNS-
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
----AACAGGTGT---
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCDGGCAGGTBCCAC
----GACAGGTGTN--
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
---TGACAGGTGTCA-
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCDGGCAGGTBCCAC
----GGCACGTGNC--
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
--AAGGCAAGTGT---
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCDGGCAGGTBCCAC
----NNCAGGTGNN--
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCDGGCAGGTBCCAC
----GACACGTGCC--
 A T G C A C G T G T A C C G T A A C T G A T C G A T G C C G T A A C T G A C T G A C G T A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T