Information for 1-GTGTGYYCTGACA (Motif 1)

C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
Reverse Opposite:
C G A T A C T G A G C T T A G C C G T A A C T G T C A G C T A G A T G C C G T A A T G C C G T A A G T C
p-value:1e-14
log p-value:-3.435e+01
Information Content per bp:1.759
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets31.2 +/- 19.3bp
Average Position of motif in Background59.4 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGYYCTGACA
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTGTGYYCTGACA
--GTGACCTT---
 C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGTGYYCTGACA-
TACATGTGCACATAAAA
 A C G T A C G T A C G T C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGTGYYCTGACA
---TGACCTYA--
 C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGTGYYCTGACA-
CAGATGTGCACATACGT
 A C G T A C G T A C G T C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGTGYYCTGACA
GGGGGTGTGTCC-----
 A C G T A C G T A C G T A C G T C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTGYYCTGACA-
GGGTGTGCCCAAAAGG
 A C G T A C G T C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGTGYYCTGACA-
--GTGGCGTGACNG
 C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTGTGYYCTGACA-
-------TTGACAG
 C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTGTGYYCTGACA
---TGCCCAGNHW
 C T A G C G A T A T C G A C G T A T C G A G T C A G T C A G T C C G A T A T C G C T G A G T A C C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A