Information for 17-TTTATGCAGC (Motif 42)

A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C C G T A A C G T C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 13.3bp
Average Position of motif in Background47.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGCAGC--
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGCAGC----
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGCAGC
GHATATKCAT-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTATGCAGC
RTTATGYAAB
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGCAGC
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATGCAGC
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATGCAGC
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTATGCAGC
-TTATGCAAT
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTATGCAGC--
-TTATGTAACAT
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGCAGC
TTTTATTGC--
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T