Information for 19-ACAKTCCACAGTGCAG (Motif 29)

C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A T G A C G A C T T C A G A G C T A C T G C A T G C T G A G T A C G A C T A C T G A C G T
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.752
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 22.0bp
Average Position of motif in Background43.4 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAKTCCACAGTGCAG
CANAGNNCAAAGTCCA-
 A C G T C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAKTCCACAGTGCAG
AGAGTCCAAAGTCCA-
 C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ACAKTCCACAGTGCAG-------
------NNNANTGCAGTGCNNTT
 C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACAKTCCACAGTGCAG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACAKTCCACAGTGCAG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAKTCCACAGTGCAG--
--TACCCACAATGCATTG
 C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACAKTCCACAGTGCAG
GGCAAAAGTCCAATAA----
 A C G T A C G T A C G T A C G T C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ACAKTCCACAGTGCAG
ACATTCCA--------
 C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-ACAKTCCACAGTGCAG
CACATTCCAT-------
 A C G T C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:ACAKTCCACAGTGCAG
------CAAAGGTCAG
 C G T A G T A C C T G A A C T G G A C T G A T C A G T C C T G A A G T C C T G A A C T G C G A T A C T G A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G