Information for 8-CABARMACGT (Motif 23)

A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T
Reverse Opposite:
T G C A A T G C T C A G C G A T A C T G A G C T C G A T T C G A C A G T T C A G
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.582
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif290.2
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets51.6 +/- 22.6bp
Average Position of motif in Background50.7 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0043.1_Max_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CABARMACGT-----
CCNNANCACGTGGTCN
 A C G T A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CABARMACGT---
---AACACGTGTT
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MNT/MA0825.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CABARMACGT---
---ACCACGTGCC
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CABARMACGT--
----GCACGTNC
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CABARMACGT---
---ACCACGTGCT
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CABARMACGT--
----GCACGTAY
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CABARMACGT--
CACAGCAGGGGG
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CABARMACGT---
--GACCACGTGGT
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CABARMACGT-
-----CACGTG
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CABARMACGT-
---ACCACGTG
 A G T C G T C A A G C T G C T A T C G A T G A C G C T A A G T C T A C G A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G