Information for 16-GGTGTGCCTTSTGCSG (Motif 20)

A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
Reverse Opposite:
A G T C T A G C C A T G A G T C G C T A A T G C G T C A G T C A C T A G A T C G A G T C C G T A A G T C C G T A A T G C G T A C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 24.3bp
Average Position of motif in Background55.9 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTGCCTTSTGCSG
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTGCCTTSTGCSG
NNGCGTGTGTGCNGCN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTGTGCCTTSTGCSG
--TGTGGATTNNN---
 A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTGTGCCTTSTGCSG
NTGGGTGTGGCC-------
 A C G T A C G T A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTGTGCCTTSTGCSG
TGGGTGTGGC--------
 A C G T A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGTGTGCCTTSTGCSG
-CTGTTCCTGG-----
 A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTGTGCCTTSTGCSG
GGTCTGGCAT------
 A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTGTGCCTTSTGCSG
TGGGTGTGGCN-------
 A C G T A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGTGTGCCTTSTGCSG-
---GTGCCGTGTGCAAA
 A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G A C G T
A C G T A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGCCTTSTGCSG
GTCTGTGGTTT------
 A C G T A C T G A T C G A C G T A C T G A C G T A C T G A T G C G A T C A C G T A C G T A T C G C G A T A C T G G A T C A T C G C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T