Information for 9-GCTTGGGDCAGTC (Motif 15)

C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A G T A C A C G T A C T G G A C T G T A C A G T C A G T C C G T A C G T A C T A G A G T C
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 30.1bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTTGGGDCAGTC
-CCAGGAACAG--
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTTGGGDCAGTC
----AGGTCA---
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCTTGGGDCAGTC--
-------TCAGTCTT
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTTGGGDCAGTC
---TGAGTCA---
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGDCAGTC--
NNNNTTGGGCACNNCN
 A C G T C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCTTGGGDCAGTC-
AGAGCGGGGTCAAGTA
 A C G T A C G T C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCTTGGGDCAGTC-
----GGGGATTTCC
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCTTGGGDCAGTC-
CGCGCCGGGTCACGTA
 A C G T A C G T C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GCTTGGGDCAGTC--
-------ACATTCCA
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCTTGGGDCAGTC--
---NGGGGATTTCCC
 C T A G A G T C C G A T A C G T A C T G A C T G A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C