Information for 1-GAATGTCCTGTGC (Motif 1)

T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
Reverse Opposite:
C T A G A T G C C G T A T A G C G C T A C T A G T C A G T G C A G A T C C T G A G A C T A C G T A G T C
p-value:1e-33
log p-value:-7.798e+01
Information Content per bp:1.569
Number of Target Sequences with motif298.0
Percentage of Target Sequences with motif39.73%
Number of Background Sequences with motif9168.9
Percentage of Background Sequences with motif20.18%
Average Position of motif in Targets52.3 +/- 24.6bp
Average Position of motif in Background50.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAATGTCCTGTGC
VAGRACAKNCTGTBC
 A C G T A C G T T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GAATGTCCTGTGC
VAGRACAKWCTGTYC
 A C G T A C G T T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAATGTCCTGTGC-
NAGNACANNNTGTNCT
 A C G T A C G T T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.69
Offset:6
Orientation:forward strand
Alignment:GAATGTCCTGTGC
------GCTGTG-
 T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAATGTCCTGTGC
--ACTTCCTGTT-
 T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GAATGTCCTGTGC-
NAGAACAGNCTGTNCT
 A C G T A C G T T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAATGTCCTGTGC
AAGAACATWHTGTTC
 A C G T A C G T T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAATGTCCTGTGC
--ATTTCCTGTN-
 T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAATGTCCTGTGC
--ATTTCCTGTN-
 T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GAATGTCCTGTGC----
-------CTGTTCCTGG
 T C A G T G C A C T G A A G C T C T A G A C G T A G T C G A T C C G A T A T C G G C A T T A C G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G