Information for 6-KGGAMTCCGA (Motif 23)

A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A
Reverse Opposite:
A C G T A G T C A C T G A C T G C G T A A C T G A C G T G T A C A G T C T G A C
p-value:1e-4
log p-value:-1.058e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif53.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.1 +/- 29.0bp
Average Position of motif in Background47.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KGGAMTCCGA--
--GAGSCCGAGC
 A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KGGAMTCCGA
-TTAATCCG-
 A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---KGGAMTCCGA----
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:KGGAMTCCGA---
-GWAAYHTGAKMC
 A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KGGAMTCCGA----
CNATAATCCGNTTNT
 A C G T A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KGGAMTCCGA----
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KGGAMTCCGA----
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KGGAMTCCGA
-TTAATCCT-
 A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KGGAMTCCGA
CCWGGAATGY--
 A C G T A C G T A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KGGAMTCCGA---
-GWAAYHTGABMC
 A C T G A C T G A C T G C G T A T G A C A C G T A G T C A G T C A C T G G T C A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C