Information for 3-CACAGCDCAGCGHCHG (Motif 23)

A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
Reverse Opposite:
A G T C C T A G A C T G C T A G A G T C A C T G A G T C A G C T A C T G G C T A C T A G A G T C A C G T C T A G A G C T A T C G
p-value:1e-5
log p-value:-1.203e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.2 +/- 25.2bp
Average Position of motif in Background40.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACAGCDCAGCGHCHG
-----CACAGN-----
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG----
---AGCTCGGCGCCAAAAGC
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG
----SCCTAGCAACAG
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG
-------CAGCC----
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG---
-------CAACGTCCGCGG
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG
GARTGGTCATCGCCC-
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG-
--CCACACAGCAGGAGA
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG
-GCCGCGCAGTGCGT-
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CACAGCDCAGCGHCHG
----GCTCGGSCTC--
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CACAGCDCAGCGHCHG-
--CCGCATAGCAACGGA
 A T G C C T G A A G T C G T C A A C T G A G T C C G A T A G T C C T G A A C T G A G T C C T A G G A T C A G T C G A T C T C A G A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A