p-value: | 1e-6 |
log p-value: | -1.389e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.36% |
Number of Background Sequences with motif | 0.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.8 +/- 23.0bp |
Average Position of motif in Background | 27.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0206.1_Zic2_2/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAYGCTSRGSGGT TCNCCTGCTGNGNNN- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAYGCTSRGSGGT CCTGCTGAGH--- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAYGCTSRGSGGT TNTCCTGCTGTGNNG- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAYGCTSRGSGGT NNTCCTGCTGTGNNN- |
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GLIS3/MA0737.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAYGCTSRGSGGT- CTTCGTGGGGGGTC |
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GLIS1/MA0735.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAYGCTSRGSGGT-- GCTTCGTGGGGGGTCT |
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PB0156.1_Plagl1_2/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CAYGCTSRGSGGT------- ---GCTGGGGGGTACCCCTT |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CAYGCTSRGSGGT GGCCYCCTGCTGDGH--- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAYGCTSRGSGGT CCCCCTGCTGTG---- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAYGCTSRGSGGT NGTCACGCTTGGCTGC |
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